Port Townsend – San Juan Island Whale Watching Tour

Our signature tour! This daylong whale watching cruise in the San Juan Islands is also the official ferry route between Port Townsend and Friday Harbor. We are the only company on the Olympic Peninsula that offers a day-long tour combining whale watching with a port of call on San Juan Island. One way passenger ferry reservations are also available, which is great for arranging for longer stays on San Juan Island.

This tour is the perfect combination of wildlife, and scenery – a true day trip adventure!

  • Heading to San Juan Island for a kayak tour? No problem. We are happy to transport your kayak on the boat for a small fee.
  • Planning to bike around San Juan Island? No problem. For a small fee, we can take your bicycle too!

As of August 16, 2021, per guidance from Jefferson County Department of Public Health, all guests must wear facemasks over nose and mouth when inside the vessel. PSE does not provide masks, so please be sure to bring masks with you!

For confirmed trips, any cancellation 48 hours prior to departure incurs a $10 charge. Changes to confirmed reservations within 48 hours are subject to a $10 per person rescheduling fee. After 48 hours, there are no refunds available. Travelers must be checked-in no later than 30 minutes prior to sailing. Boarding closes 15 minutes before departure. Due to stringent departure requirements, late arrivals will be cancelled with no refunds.

Are you traveling with an infant?
Children under the age of 2 can travel for free; however, if the boat is full that day, your child will be required to sit on your lap. You also have the option of purchasing a child’s rate ticket to ensure seating for your infant.

Want to learn more? Here’s what you can expect:

Check in at the office

30 minutes prior to departure, check in at the PSE Office in Port Townsend.

Board the boat

Right out the office front door, we board the comfy 70-seat Glacier Spirit.

Safety first

Your safety is our number one priority – once aboard, your captain will tell you everything you need to know to enjoy your trip.

Leaving Port Townsend

The Glacier Spirit leaves Point Hudson in the Victorian Seaport of Port Townsend. A great destination for a day, weekend, or longer. Our round trip tour departs Port Townsend at 9am and heads across the magnificent Strait of Juan de Fuca, to the San Juan Islands. Along the way, the natural history and wildlife are pointed out by our trained marine naturalist.

Blueberry buckle

Don’t miss a PSE exclusive – Sherri’s famous blueberry buckle – made fresh daily and available in our galley.


Usually, about ninety minutes into the cruise, orca whales are sighted along the western flanks of San Juan Island. The Southern Resident orcas are actually a large extended family, or clan, comprised of three pods: J, K, and L pods.Within each pod, families form into sub-pods centered around older females, usually grandmothers or great-grandmothers. Both male and female offspring remain in close association with their mothers for life. ​​Each Southern Resident pod uses a characteristic dialect of calls (sounds) to communicate. Certain calls are common between all three pods. The calls used by the Southern Resident community are unlike the calls used by any other community of killer whales. These calls can travel 10 miles or more under water.

Friday Harbor

Once we have had a wonderful encounter with the orcas, it is time to move into the islands and our port of call, Friday Harbor. This was once a small fishing village that has now grown into one of the Pacific Northwest’s top destinations.

While in town, browse the many shops along Spring Street and enjoy great local cuisine that the many restaurants have to offer (we have menus onboard that you can review prior to arrival).  And of course, we heartily recommend visiting The Whale Museum!

We spend two hours in Friday Harbor, before heading out again to see more wildlife.


Wildlife on Smith Island

Besides the orcas, there are many other species of whales and marine mammals to show you along the way home. It is not uncommon to see minke whales as well as gray and humpback whales all in one day. Steller and California sea lions dot the many coast lines we pass by. Dall’s porpoises are often found in close proximity to the orca whales and can be seen playing in the bow wake. A special highlight is a stop near Smith Island, home to an amazing array of sea lions, eagles, seals, and other wildlife. See

Back to Port Townsend

We make it back to Port Townsend by 5pm, making this a great way to combine; your vacation on the Olympic Peninsula, a day in the San Juan Islands, plus a whale watch experience.

Our Guarantee

If you don’t see whales on your trip, we will give you a voucher for another trip on us. Guarantee is not valid for a specific whale species, or cash back.

See where the Glacier Spirit is now.
Book Full TourBook Port Townsend to San JuanBook San Juan to Port Townsend



Port Townsend with 2 hour lunch stop on San Juan Island (Friday Harbor)


June – September, 2022
9am departures


8 hours. Travelers must be checked-in no later than 30 minutes prior to sailing. Boarding closes 15 minutes before departure. Due to stringent departure requirements, late arrivals will be cancelled with no refunds.


Whale watching


Adult: $140
Child (2-10): $110
Infants: FREE
Bicycle/Kayak: $15

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